rPath


Pathways taken from the Reactome database.


Phenotypes comparison based on a pathway consensus
approach. Assess the relationship between candidate genes and a
set of phenotypes based on additional genes related to the
candidate (e.g. Pathways or network neighbors).

Matthew Page

PCAN

Phenotype Consensus ANalysis (PCAN)

rPath function

A data frame with 1345 rows and 2 columns:
<dl>
<dt>Pathway</dt><dd>Reactome ID.</dd> <dt>Pathway_name</dt><dd>The name of the pathway.</dd> </dl>

Format

<a href="http://www.reactome.org/download/current/UniProt2Reactome.txt">http://www.reactome.org/download/current/UniProt2Reactome.txt</a>

Source

Pathways taken from the Reactome database.

rPath: Reactome pathways (Example data)

Description

Arguments

Format

Source

Examples