Integer vector giving the model type index for each regime
PCMMapModelTypesToRegimes(model, tree, ...)
a PCM model
a phylo object with an edge.part member
additional parameters passed to methods
an integer vector with elements corresponding to the elements in
PCMTreeGetPartNames(tree)
This is a generic S3 method. The default implementation for the basic
class PCM returns a vector of 1's, because it assumes that a single model type
is associated with each regime. The implementation for mixed Gaussian models
returns the mapping attribute of the MixedGaussian object reordered to
correspond to PCMTreeGetPartNames(tree)
.