PCpheno (version 1.30.0)

overlap: Count the number of proteins shared by protein complexes

Description

Count the number of proteins shared by protein complexes

Usage

overlap(interactome)

Arguments

interactome

Binary matrix composed of genes (rows) and biological complexes (columns) (see package ScISI)

Value

The returned value is a data frame with components:

C1

Name of the first biological complex

C2

Name of the second biological complex

nbSharedProt

Number of proteins in common

See Also

ScISI

Examples

xx = cbind("a"=c(0,1,1,1),"b"=c(1,1,0,1))
overlap(xx)