TCGA.input

<p>This data set gives the TCGA 16 cancer types tumor versus normal t-test scores of each gene.</p>

datasets

A meta gene set analysis tool developed based on principles of Pareto dominance (William B T Mock (2011) <doi:10.1007/978-1-4020-9160-5_341>). It is designed to combine gene set analysis p-values from multiple transcriptome datasets (e.g., microarray and RNA-Seq). The novel Pareto method for p-value combination allows PEACH to properly model heterogeneity and correlation in Omics datasets.

Jinyan Chan

PEACH

Pareto Enrichment Analysis for Combining Heterogeneous Datasets

TCGA.input function

<p>A matrix containing the t statistics of 20501 genes/rows and 16 cancer types/columns</p>

TCGA.input: A sample of 16 cancers gene differential expression analysis t statistic score data

Description

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