PEtests (version 0.1.0)

PEtests-package: Power-Enhanced (PE) Tests for High-Dimensional Data

Description

The package implements several two-sample power-enhanced mean tests, covariance tests, and simultaneous tests on mean vectors and covariance matrices for high-dimensional data.

Details

There are three main functions:
covtest
meantest
simultest

References

Chen, S. X. and Qin, Y. L. (2010). A two-sample test for high-dimensional data with applications to gene-set testing. Annals of Statistics, 38(2):808–835. tools:::Rd_expr_doi("10.1214/09-AOS716")

Cai, T. T., Liu, W., and Xia, Y. (2013). Two-sample covariance matrix testing and support recovery in high-dimensional and sparse settings. Journal of the American Statistical Association, 108(501):265–277. tools:::Rd_expr_doi("10.1080/01621459.2012.758041")

Cai, T. T., Liu, W., and Xia, Y. (2014). Two-sample test of high dimensional means under dependence. Journal of the Royal Statistical Society: Series B: Statistical Methodology, 76(2):349–372. tools:::Rd_expr_doi("10.1111/rssb.12034")

Li, J. and Chen, S. X. (2012). Two sample tests for high-dimensional covariance matrices. The Annals of Statistics, 40(2):908–940. tools:::Rd_expr_doi("10.1214/12-AOS993")

Yu, X., Li, D., and Xue, L. (2022). Fisher’s combined probability test for high-dimensional covariance matrices. Journal of the American Statistical Association, (in press):1–14. tools:::Rd_expr_doi("10.1080/01621459.2022.2126781")

Yu, X., Li, D., Xue, L., and Li, R. (2022). Power-enhanced simultaneous test of high-dimensional mean vectors and covariance matrices with application to gene-set testing. Journal of the American Statistical Association, (in press):1–14. tools:::Rd_expr_doi("10.1080/01621459.2022.2061354")

Examples

n1 = 100; n2 = 100; pp = 500
set.seed(1)
X = matrix(rnorm(n1*pp), nrow=n1, ncol=pp)
Y = matrix(rnorm(n2*pp), nrow=n2, ncol=pp)
covtest(X, Y)
meantest(X, Y)
simultest(X, Y)