PKbioanalysis (version 0.5.0)

plot_chrom: Plot Chromatogram per Sample for Selected transitions

Description

This function plots chromatograms for selected transitions per sample.

Usage

plot_chrom(
  chrom_res,
  ncol = 2,
  transitions_ids = NULL,
  sample_id,
  integrated = FALSE,
  show_RT = FALSE,
  smoothed = FALSE
)

Arguments

chrom_res

ChromRes object

ncol

Number of columns for facet_wrap. If 0, the chromatograms are overlayed in a single plot.

transitions_ids

Vector of transition IDs to plot. If NULL, all transitions are plotted.

sample_id

Sample ID to plot.

integrated

Boolean to show integrated area overlayed

show_RT

Boolean to show RT values

smoothed

Boolean to show smoothed chromatogram

Examples

if (FALSE) {
path <- system.file("extdata", "waters_raw_ex", package="PKbioanalysis")
main <- read_chrom(path, method = 1)
plot_chrom(main, ncol = 2, transitions_ids = c(18,19,20), sample_id = 3)
plot_chrom(main, ncol = 3, transitions_ids = c(18,19,20), sample_id = 3)
plot_chrom(main, ncol = 1, transitions_ids = c(18,19,20), sample_id = 3)
plot_chrom(main, ncol = NULL, transitions_ids = c(18,19,20), sample_id = 3)
}