np.gof: Goodness-of-Fit tests in nonparametric regression models

Description

This routine tests the equality of a nonparametric regression curve, $m$, and a given function, $m_0$, from a sample ${(Y_i, t_i): i=1,...,n}$, where: $$Y_i= m(t_i) + \epsilon_i.$$ The unknown function $m$ is smooth, fixed equally spaced design is considered, and the random errors, ${\epsilon_i}$, are allowed to be time series. The test statistic used for testing the null hypothesis, $H0: m = m_0$, derives from a Cramer-von-Mises-type functional distance between a nonparametric estimator of $m$ and $m_0$.

Usage

np.gof(data = data, m0 = NULL, h.seq = NULL, w = NULL, 
estimator = "NW", kernel = "quadratic", time.series = FALSE, 
Tau.eps = NULL, h0 = NULL, lag.max = 50, p.max = 3, 
q.max = 3, ic = "BIC", num.lb = 10, alpha = 0.05)

Arguments

data

data[, 1] contains the values of the response variable, $Y$; data[, 2] contains the values of the explanatory variable, $t$.

the considered function in the null hypothesis. If NULL (the default), the zero function is considered.

h.seq

the statistic test is performed using each bandwidth in the vector h.seq. If NULL (the default), 10 equidistant values between zero and a quarter of the range of ${t_i}$ are considered.

support interval of the weigth function in the test statistic. If NULL (the default), $(q_{0.1}, q_{0.9})$ is considered, where $q_p$ denotes the quantile of order $p$ of ${t_i}$.

estimator

allows us the choice between NW (Nadaraya-Watson) or LLP (Local Linear Polynomial). The default is NW.

kernel

allows us the choice between gaussian, quadratic (Epanechnikov kernel), triweight or uniform kernel. The default is quadratic.

time.series

it denotes whether the data are independent (FALSE) or if data is a time series (TRUE). The default is FALSE.

Tau.eps

it contains the sum of autocovariances associated to the random errors of the regression model. If NULL (the default), the function tries to estimate it: it fits an ARMA model (selected according to an information criterium) to the residuals from the fitt

if Tau.eps=NULL, h0 contains the pilot bandwidth used for obtaining the residuals to construct the default for Tau.eps. If NULL (the default), a quarter of the range of ${t_i}$ is considered.

lag.max

if Tau.eps=NULL, lag.max contains the maximum delay used to construct the default for Tau.eps. The default is 50.

p.max

if Tau.eps=NULL, the ARMA model is selected between the models ARMA(p,q) with 0<=p<=p.max and 0<=q<=q.max. The default is 3.

q.max

if Tau.eps=NULL, the ARMA model is selected between the models ARMA(p,q) with 0<=p<=p.max and 0<=q<=q.max. The default is 3.

ic

if Tau.eps=NULL, ic contains the information criterion used to suggest the ARMA model. It allows us to choose between: "AIC", "AICC" or "BIC" (the default).

num.lb

if Tau.eps=NULL, it checks the suitability of the selected ARMA model according to the Ljung-Box test and the t-test. It uses up to num.lb delays in the Ljung-Box test. The default is 10.

alpha

if Tau.eps=NULL, alpha contains the significance level which the ARMA model is checked. The default is 0.05.

`Value`

A list with a dataframe containing:
h.seqsequence of bandwidths used in the test statistic.
Q.mvalues of the test statistic (one for each bandwidth in h.seq).
Q.m.normalisednormalised value of Q.m.
p.valuep-values of the corresponding statistic tests (one for each bandwidth in h.seq).
Moreover, if data is a time series and Tau.eps is not especified:
pv.Box.testp-values of the Ljung-Box test for the model fitted to the residuals.
pv.t.testp-values of the t.test for the model fitted to the residuals.
ar.maARMA orders for the model fitted to the residuals.

`Details`

A weight function (specifically, the indicator function 1$_{[w[1] , w[2]]}$) is introduced in the test statistic to allow elimination (or at least significant reduction) of boundary effects from the estimate of $m(t_i)$.

If Tau.eps=NULL and the routine is not able to suggest an approximation for Tau.eps, it warns the user with a message saying that the model could be not appropriate and then it shows the results. In order to construct Tau.eps, the procedures suggested in Muller and Stadmuller (1988) and Herrmann et al. (1992) can be followed.

The implemented statistic test particularizes that one in Gonzalez Manteiga and Vilar Fernandez (1995) to the case where the considered class in the null hypothesis has only one element.

`References`

Biedermann, S. and Dette, H. (2000) Testing linearity of regression models with dependent errors by kernel based methods. Test 9, 417-438.

Gonzalez-Manteiga, W. and Aneiros-Perez, G. (2003) Testing in partial linear regression models with dependent errors. J. Nonparametr. Statist. 15, 93-111.

Gonzalez-Manteiga, W. and Cao, R. (1993) Testing the hypothesis of a general linear model using nonparametric regression estimation. Test 2, 161-188.

Gonzalez Manteiga, W. and Vilar Fernandez, J. M. (1995) Testing linear regression models using non-parametric regression estimators when errors are non-independent. Comput. Statist. Data Anal. 20, 521-541.

Herrmann, E., Gasser, T. and Kneip, A. (1992) Choice of bandwidth for kernel regression when residuals are correlated. Biometrika 79, 783-795

Muller, H.G. and Stadmuller, U. (1988) Detecting dependencies in smooth regression models. Biometrika 75, 639-650

`See Also`

Other related functions are np.est, par.gof and plrm.gof.

`Examples`

Run this code# EXAMPLE 1: REAL DATA
data <- matrix(10,120,2)
data(barnacles1)
barnacles1 <- as.matrix(barnacles1)
data[,1] <- barnacles1[,1]
data <- diff(data, 12)
data[,2] <- 1:nrow(data)

np.gof(data)



# EXAMPLE 2: SIMULATED DATA
## Example 2a: dependent data

set.seed(1234)
# We generate the data
n <- 100
t <- ((1:n)-0.5)/n
m <- function(t) {0.25*t*(1-t)}
f <- m(t)
f.function <- function(u) {0.25*u*(1-u)}

epsilon <- arima.sim(list(order = c(1,0,0), ar=0.7), sd = 0.01, n = n)
y <-  f + epsilon
data <- cbind(y,t)

## Example 2a.1: true null hypothesis
np.gof(data, m0=f.function, time.series=TRUE)

## Example 2a.2: false null hypothesis
np.gof(data, time.series=TRUE)
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