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The function `get_final_signature` uses to identify the candidate prognosis-related pathways based on the PMAPscore.
get_final_signature(pfs_score, sur, wilcox_p = 0.05, uni_cox_p = 0.01)
A 2 X n matrix that contains the pfs_score in each sample of the signal pathways. Noted the matrix can be generated by the function `get_pfs_score`.
This data contains survival status and survival time of each sample.
The threshold of p value for Wilcoxon rank-sum test.
The threshold of p value for univariate Cox regression analysis.
Return the candidate prognosis-related pathways
# NOT RUN { #load the data. data(pfs_score,sur) #perform function `get_final_signature`. final_signature<-get_final_signature(pfs_score,sur) # }
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