PQLseq (version 1.2.1)

ExampleBSseq: BSseq example dataset

Description

A simulated example dataset of BSseq for PQLseq.

Usage

data(ExampleBSseq)

Format

Contains the following objects:

mcount

a data frame containing the read counts for 5 sites.

predictor

a vector of 100 observations on a continuous variable.

relatednessmatrix

a genetic relationship matrix for 100 individuals.

totalcount

a data frame containing the total read counts for 5 sites.

Examples

# NOT RUN {
data(ExampleBSseq)
attach(ExampleBSseq)
model_DNA=pqlseq(RawCountDataSet=mcount, Phenotypes=predictor, 
  RelatednessMatrix=relatednessmatrix, LibSize=totalcount,
  fit.model="BMM",numCore=1)
head(model_DNA)
detach(ExampleBSseq)
# }