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PREDA (version 1.18.0)

GenomicAnnotationsFilter_pos: filter annotations to keep selected chromosomes

Description

filter annotations to keep selected chromosomes

Usage

# GenomicAnnotationsFilter_pos(.Object, chrToRetain, chrAsLabels=FALSE)
GenomicAnnotationsFilter_pos(.Object, ...)

Arguments

.Object
An object of class GenomicAnnotations or classes inheriting from GenomicAnnotations
...
See below
chrToRetain:
List of chromosomes to be maintained after removing the annotations for all the other chromosomes.

chrAsLabels:
Logical, TRUE if chromosomes are listed as their character labels, instead of using the numeric indexes