PREDA (version 1.18.0)

GenomicRegionsFilter_pos: filter genomic regions to keep selected chromosomes

Description

filter genomic regions to keep selected chromosomes

Usage

# GenomicRegionsFilter_pos(.Object, chrToRetain, chrAsLabels=FALSE, quiet=FALSE)
GenomicRegionsFilter_pos(.Object, ...)

Arguments

.Object

An object of class GenomicRegions

...

See below

chrToRetain:

List of chromosomes to be maintained after removing the genomic regions for all the other chromosomes.

chrAsLabels:

Logical, TRUE if chromosomes are listed as their character labels, instead of using the numeric indexes

quiet:

Logical, if FALSE a message is printed to warn of empty (NULL) result of the filtering selection.