PSCBS (version 0.12.2)

plotTracks.CBS: Plots copy numbers along the genome

Description

Plots copy numbers along the genome for one or more chromosomes. Each type of track is plotted in its own panel.

Usage

## S3 method for class 'CBS':
plotTracks(x, scatter=TRUE, pch=".", cex=1, grid=FALSE, Clim=c(0, 6), xScale=1e-06, ..., add=FALSE)

Arguments

x

A result object returned by segmentByCBS().

pch

The type of points to use.

Clim

The range of copy numbers.

xScale

The scale factor used for genomic positions.

...

Not used.

add

If TRUE, the panels plotted are added to the existing plot, otherwise a new plot is created.

Value

• Returns nothing.