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PSCBS (version 0.38.4)

plotTracks.CBS: Plots copy numbers along the genome

Description

Plots copy numbers along the genome for one or more chromosomes. Each type of track is plotted in its own panel.

Usage

## S3 method for class 'CBS':
plotTracks(x, scatter=TRUE, pch=20, col="gray", meanCol="purple", cex=1, grid=FALSE,
  Clim="auto", xScale=1e-06, Clab="auto", ..., byIndex=FALSE, mar=NULL, add=FALSE)

Arguments

x
A result object returned by segmentByCBS().
pch
The type of points to use.
Clim
The range of copy numbers.
xScale
The scale factor used for genomic positions.
...
Not used.
add
If TRUE, the panels plotted are added to the existing plot, otherwise a new plot is created.

Value

  • Returns nothing.