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PSCBS (version 0.38.4)

writeSegments.CBS: Writes the table of segments to file

Description

Writes the table of segments to file.

Usage

## S3 method for class 'CBS':
writeSegments(fit, name=getSampleName(fit), tags=NULL, ext="tsv", path=NULL,
  addHeader=TRUE, createdBy=NULL, sep="", nbrOfDecimals=4L, splitters=FALSE,
  overwrite=FALSE, skip=FALSE, ...)

name, tags{Name and optional tags part of the filename}. path{The directory where the file will be written.} addHeader{If TRUE, header comments are written.} createdBy{A header comment of whom created the file.} splitters{If TRUE, each chromosome is separated by a row of missing values.} overwrite, skip{If an output file already exists, these arguments specifies what should happen.} ...{Additional arguments pass to getSegments().}

Returns the pathname of the the file written.

[object Object]

Utilizes *getSegments(). For more information see CBS..

internal methods

Arguments