Calculates the fraction of the genome lost, gained, or aberrant either way (in sense of total copy numbers), using definitions closely related to those presented in [1].
# S3 method for CBS
getFractionOfGenomeLost(fit, ...)Not used.
Returns a double in [0,1].
[1] Fridlyand et al. Breast tumor copy number aberration phenotypes and genomic instability, BMC Cancer, 2006.
Internally, *getCallStatistics() is used.
For more information see CBS.