getSegments.AbstractCBS

AbstractCBS.getSegments

getSegments,AbstractCBS-method

AbstractCBS.setSegments

setSegments.AbstractCBS

setSegments,AbstractCBS-method

If <code><a rd-options="base:logical" href="/link/TRUE?package=PSCBS&version=0.63.0&to=base%3Alogical" data-mini-rdoc="base:logical::TRUE">TRUE</a></code>, redundant and intermediate information is dropped.

simplify

If <code><a rd-options="base:logical" href="/link/TRUE?package=PSCBS&version=0.63.0&to=base%3Alogical" data-mini-rdoc="base:logical::TRUE">TRUE</a></code>, "splitters" between chromosomes are
 preserved, otherwise dropped.

splitters

methods

internal

Segmentation of allele-specific DNA copy number data and detection of regions with abnormal copy number within each parental chromosome.  Both tumor-normal paired and tumor-only analyses are supported.

Henrik Bengtsson

PSCBS

Analysis of Parent-Specific DNA Copy Numbers

Pierre Neuvial

Venkatraman E. Seshan

Adam B. Olshen

Paul T. Spellman

Richard A. Olshen

getSegments.AbstractCBS function

If <code><a rd-options='base:logical' href='TRUE'>TRUE</a></code>, redundant and intermediate information is dropped.

If <code><a rd-options='base:logical' href='TRUE'>TRUE</a></code>, "splitters" between chromosomes are
 preserved, otherwise dropped.

Gets the segments — getSegments.AbstractCBS

Gets the segments

getSegments.AbstractCBS: Gets the segments

Description

Usage

Arguments

Value

See Also