updateMeans.AbstractCBS

AbstractCBS.updateMeans

updateMeans,AbstractCBS-method

updateMeans.CBS

updateMeans.NonPairedPSCBS

updateMeans.PairedPSCBS

Updates the CN mean levels for each segment independently as if they were one large segment.
 The locus-level data is not updated/modified.

methods

internal

Segmentation of allele-specific DNA copy number data and detection of regions with abnormal copy number within each parental chromosome.  Both tumor-normal paired and tumor-only analyses are supported.

Henrik Bengtsson

PSCBS

Analysis of Parent-Specific DNA Copy Numbers

Pierre Neuvial

Venkatraman E. Seshan

Adam B. Olshen

Paul T. Spellman

Richard A. Olshen

Frank E Harrell Jr

updateMeans.AbstractCBS function

<dl> <dt>...</dt>
<dd>Arguments specific to the class.</dd></dl>

Arguments

Author

Updates the CN mean levels for each segment independently — updateMeans.AbstractCBS

<dl>

 <dt>...</dt>
<dd>Arguments specific to the class.</dd>

</dl>

Updates the CN mean levels for each segment independently

updateMeans.AbstractCBS: Updates the CN mean levels for each segment independently

Description

Usage

Value

Arguments

Author