MQDataReader$plotNameMapping

<p>Convenience function to plot the mapping (e.g. to a PDF device for reporting).
The data frame can be accessed directly via <code>.$raw_file_mapping</code>.
If no mapping exists, the function prints a warning to console and returns NULL (which is safe to use in print(NULL)).</p>

Generates Proteomics (PTX) quality control (QC) reports for shotgun LC-MS data analyzed with the
MaxQuant software suite (see <http://www.maxquant.org>).
Reports are customizable (target thresholds, subsetting) and available in HTML or PDF format.
Published in J. Proteome Res., Proteomics Quality Control: Quality Control Software for MaxQuant Results (2015) <doi:10.1021/acs.jproteome.5b00780>.

Chris Bielow

MQDataReader$plotNameMapping: Plots the current mapping of Raw file names to their shortened version.

Description

Arguments

Value