read.MQ

see <code><a rd-options="" href="/link/MQDataReader%24readMQ?package=PTXQC&version=0.92.6" data-mini-rdoc="PTXQC::MQDataReader$readMQ">MQDataReader$readMQ</a></code>

file

filter

type

col_subset

add_fs_col

LFQ_action

For params, see <code><a rd-options="" href="/link/MQDataReader%24readMQ?package=PTXQC&version=0.92.6" data-mini-rdoc="PTXQC::MQDataReader$readMQ">MQDataReader$readMQ</a></code>.

Generates Proteomics (PTX) quality control (QC) reports for shotgun LC-MS data analyzed with the
MaxQuant software suite.
Reports are customizable (target thresholds, subsetting) and available in HTML or PDF format.
Published in J. Proteome Res., Proteomics Quality Control: Quality Control Software for MaxQuant Results (2015) 'doi:10.1021/acs.jproteome.5b00780'.

Chris Bielow

PTXQC

Quality Report Generation for MaxQuant Results

read.MQ function

see <code><a rd-options='' href='MQDataReader$readMQ'>MQDataReader$readMQ</a></code>

For params, see <code><a rd-options='' href='MQDataReader$readMQ'>MQDataReader$readMQ</a></code>.

read.MQ: Convenience wrapper for MQDataReader when only a single MQ file should be read and file mapping need not be stored.

Description

Usage

Arguments

Value