as.data.frame

as.data.frame,MotifEnrichmentReport-method

row.names

optional


  Convert a MotifEnrichmentReport into a data.frame object


A toolkit of high-level functions for DNA motif scanning
and enrichment analysis built upon Biostrings. The main
functionality is PWM enrichment analysis of already known PWMs
(e.g. from databases such as MotifDb), but the package also
implements high-level functions for PWM scanning and
visualisation. The package does not perform "de novo" motif
discovery, but is instead focused on using motifs that are
either experimentally derived or computationally constructed by
other tools.

Robert Stojnic

PWMEnrich

PWM enrichment analysis

as.data.frame,MotifEnrichmentReport-method function

Convert a MotifEnrichmentReport into a data.frame object

as.data.frame,MotifEnrichmentReport-method: Convert a MotifEnrichmentReport into a data.frame object

Description

Arguments