# PairViz v1.3.4

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## Visualization using Graph Traversal

Improving graphics by ameliorating order effects, using Eulerian tours and Hamiltonian decompositions of graphs.

## Functions in PairViz

Name | Description | |

desaturate_color | Desaturates colors | |

eseq | Construct eulerian paths on the complete graph where nodes are integers 1..n. | |

find_path | Constructs a path from a matrix of edge weights. | |

even_graph | Class of graphs where all nodes have even degree | |

hpaths | Hamiltonian paths on the complete graph on 1..n, using Lucas-Walecki constructions. | |

pcp | Enhanced parallel coordinate plots. | |

guided_pcp | Guided parallel coordinate plot. | |

path_weights | Utility functions to manipulate pairwise information. | |

table_plot | Plots rectangles on a grid | |

weighted_hpaths | Constructs weight decreasing hamiltonian paths | |

etour | Constructs eulerian tours on a graph. | |

eulerian | ~~ Methods for Function eulerian ~~ | |

mk_even_graph | Constructs an even graph | |

best_orientation | Re-orients a path to be weight-decreasing | |

order_best | Uses brute-force enumeration to find the best hamiltonian on the complete graph on 1..n. | |

cancer | Cancer Survival data | |

mc_plot | Multiple comparison plot. | |

mk_complete_graph | Constructs a complete graph. | |

knn_graph | Functions to construct graphs. | |

overview | Overview of PairViz package | |

path_cor | Measures the tendency of edge weights to increase. | |

order_tsp | Uses tsp to find the best hamiltonian on the complete graph on 1..n | |

spreadout | Functions to prepare for categorical parallel coordinates, drawn by catpcp. | |

overlayCI | Function to overlay confidence intervals on the current plot. | |

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## Vignettes of PairViz

Name | ||

MultipleComparisons.Rmd | ||

PairVizIntroduction.Rmd | ||

pcp.Rmd | ||

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## Last month downloads

## Details

Date | 2020-10-04 |

biocViews | |

License | GPL-2 |

VignetteBuilder | knitr |

RoxygenNote | 7.1.1 |

NeedsCompilation | no |

Packaged | 2020-10-04 10:07:41 UTC; catherine |

Repository | CRAN |

Date/Publication | 2020-10-05 09:50:20 UTC |

suggests | alr4 , colorspace , igraph , knitr , multcomp , RColorBrewer , rmarkdown , scagnostics , scales , Sleuth3 |

depends | graph , gtools , methods , TSP |

Contributors | C.B. Hurley, R.W. Oldford |

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