H3K4me3.TDH.immune.chunk12.cluster4

<p>26 samples, each with the same overlapping peak(s).</p>

datasets

A quadratic time dynamic programming algorithm
can be used to compute an approximate solution to the problem of
finding the most likely changepoints
with respect to the Poisson likelihood, subject
to a constraint on the number of segments, and the changes which must
alternate: up, down, up, down, etc. For more info read
<http://proceedings.mlr.press/v37/hocking15.html>
"PeakSeg: constrained optimal segmentation and supervised penalty learning
for peak detection in count data" by TD Hocking et al,
proceedings of ICML2015.

Toby Hocking

PeakSegDP

H3K4me3.TDH.immune.chunk12.cluster4: Histone ChIP-seq data, 26 samples, chr1 subset

Description

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