H3K4me3_PGP_immune_chunk24

<p>This data set revealed a bug in the PeakSegPDPA solver: at one point
  it recovered a less likely model than PeakSegDP for McGill0091, 13 segments.</p>

datasets

Computes optimal changepoint models using the
Poisson likelihood for non-negative count data,
subject to the PeakSeg constraint:
the first change must be up, second change down, third change up, etc.
For more info about the models and algorithms,
read "Constrained Dynamic Programming and Supervised Penalty Learning
Algorithms for Peak Detection"
<https://jmlr.org/papers/v21/18-843.html> by TD Hocking et al.

Toby Hocking

PeakSegOptimal

Optimal Segmentation Subject to Up-Down Constraints

H3K4me3_PGP_immune_chunk24 function

<p>A data frame with 66713 observations on the following 5 variables.</p>

H3K4me3_PGP_immune_chunk24: H3K4me3_PGP_immune ChIP-seq data set chunk 24

Description

Usage

Arguments

Format