H3K4me3_XJ_immune_chunk1

<p>Some test data sets for the Poisson PeakSeg Segment Neighborhood Algo.</p>

datasets

Computes optimal changepoint models using the
Poisson likelihood for non-negative count data,
subject to the PeakSeg constraint:
the first change must be up, second change down, third change up, etc.
For more info about the models and algorithms,
read "Constrained Dynamic Programming and Supervised Penalty Learning
Algorithms for Peak Detection"
<https://jmlr.org/papers/v21/18-843.html> by TD Hocking et al.

Toby Hocking

PeakSegOptimal

Optimal Segmentation Subject to Up-Down Constraints

H3K4me3_XJ_immune_chunk1 function

<p>A data frame with 18027 observations on 5 variables: cell.type,
  sample.id, chromStart, chromEnd, coverage.</p>

H3K4me3_XJ_immune_chunk1: H3K4me3_XJ_immune chunk 1

Description

Usage

Arguments

Format