summary.binMS

An object of class <code><a rd-options="" href="/link/binMS?package=PepSAVIms&version=0.9.1" data-mini-rdoc="PepSAVIms::binMS">binMS</a></code>

object

Arguments passed to dot-dot-dot are ignored


Prints a text description of the binning process.  Displays arguments passed
to the <code>binMS</code> routine, how many m/z levels were chosen for each
criterion, how many candidate compounds were chosen overall, and how many
candidate compounds were obtained after consolidation.


An implementation of the data processing and data analysis portion
of a pipeline named the PepSAVI-MS which is currently under development by
the Hicks laboratory at the University of North Carolina.  The statistical
analysis package presented herein provides a collection of software tools
used to facilitate the prioritization of putative bioactive peptides from a
complex biological matrix.  Tools are provided to deconvolute mass
spectrometry features into a single representation for each peptide charge
state, filter compounds to include only those possibly contributing to the
observed bioactivity, and prioritize these remaining compounds for those
most likely contributing to each bioactivity data set.

summary.binMS: Overview of the binning process

Description

Usage

Arguments