drugPerturbationSig
function,
for the available perturbation PharmacoSets
. This function allows the
user to skip these very lengthy calculation steps for the datasets available,
and start their analysis from the already computed signatures
downloadPertSig(name, saveDir = file.path(".", "PSets", "Sigs"), myfn = NULL, verbose = TRUE)
Character
string, the name of the PharmacoSet for which to
download signatures. The name should match the names returned in the
availablePSets table.Character
string with the folder path where the
PharmacoSet should be saved. Defaults to "./PSets/Sigs/"
. Will
create directory if it does not exist.character
string, the file name to save the dataset underbool
Should status messages be printed during download.
Defaults to TRUE.