PhySortR-package

PhySortR provides a quick and highly flexible function for the screening (within a tree) of Exclusive clades that comprise only the target taxa and/or Non-Exclusive clades that includes a defined portion of non-target taxa. Support is also provided for both traditional and extended Newick formatted phylogenetic trees.
A full list of functions can be displayed by <code><a href="/link/library(help%20%3D%20PhySortR)?package=PhySortR&version=1.0.9" data-mini-rdoc="PhySortR::library(help = PhySortR)">library(help = PhySortR)</a></code>.

 package

Screens and sorts phylogenetic trees in both traditional and
extended Newick format. Allows for the fast and flexible screening (within
a tree) of Exclusive clades that comprise only the target taxa and/or Non-
Exclusive clades that includes a defined portion of non-target taxa.

Timothy Stephens

PhySortR

A Fast, Flexible Tool for Sorting Phylogenetic Trees

Debashish Bhattacharya

Mark Ragan

Cheong Xin Chan

PhySortR-package function

Timothy G. Stephens, Debashish Bhattacharya, Mark A. Ragan, Cheong Xin Chan 
Maintainer: Timothy G. Stephens &lt;timothy.stephens1@uqconnect.edu.au&gt;

Author

PhySortR provides a quick and highly flexible function for the screening (within a tree) of Exclusive clades that comprise only the target taxa and/or Non-Exclusive clades that includes a defined portion of non-target taxa. Support is also provided for both traditional and extended Newick formatted phylogenetic trees.
A full list of functions can be displayed by <code><a href='https://rdrr.io/r/base/library.html'>library(help = PhySortR)</a></code>.

Package:	PhySortR
Type:	Package
Version:	1.0.8
Date:	2018-07-20
License:	GPL (>= 3)

PhySortR-package: A Fast, Flexible Tool for Sorting Phylogenetic Trees

Description

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Author

Details

References