extract.equivalent_shifts

an object of class <code>equivalent_shifts</code>, result of
function <code><a rd-options="" href="/link/equivalent_shifts?package=PhylogeneticEM&version=1.0.0" data-mini-rdoc="PhylogeneticEM::equivalent_shifts">equivalent_shifts</a></code>

the number of the trait to be extracted. Default to 1.

trait

what


<code>extract.equivalent_shifts</code> takes an object of class
<code>equivalent_shifts</code>, result of function <code><a rd-options="" href="/link/equivalent_shifts?package=PhylogeneticEM&version=1.0.0" data-mini-rdoc="PhylogeneticEM::equivalent_shifts">equivalent_shifts</a></code>,
and returns the shifts of root values for a given trait.



Implementation of the automatic shift detection method for
Brownian Motion (BM) or Ornstein–Uhlenbeck (OU) models of trait evolution on
phylogenies. Some tools to handle equivalent shifts configurations are also
available.

Paul Bastide

PhylogeneticEM

Automatic Shift Detection using a Phylogenetic EM

extract.equivalent_shifts function

an object of class <code>equivalent_shifts</code>, result of
function <code><a rd-options='' href='equivalent_shifts'>equivalent_shifts</a></code>


<code>extract.equivalent_shifts</code> takes an object of class
<code>equivalent_shifts</code>, result of function <code><a rd-options='' href='equivalent_shifts'>equivalent_shifts</a></code>,
and returns the shifts of root values for a given trait.


extract.equivalent_shifts: Extract the shifts values for one trait.

Description

Usage

Arguments

Value

See Also