segmentation.OU.specialCase.same_shifts

phylo

the previous list of shifts (only position is used)

shifts_old

moments of the conditional law of X given Y, result
of function <code>compute_M.OU.specialCase</code>

conditional_law_X

selection.strength


<code>segmentation.OU.specialCase.same_shifts</code> keeps the same shifts position,
and optimize the sum of costs using function 
<code>optimize_costs_given_shift_position.OU.specialCase</code>.


internal


Implementation of the automatic shift detection method for
Brownian Motion (BM) or Ornstein–Uhlenbeck (OU) models of trait evolution on
phylogenies. Some tools to handle equivalent shifts configurations are also
available.

segmentation.OU.specialCase.same_shifts: Segmentation in the OU special case, conserving the same shifts position.

Description

Usage

Arguments

Value

Details