transform_branch_length

A phylogenetic tree of class <code><a rd-options="ape" href="/link/phylo?package=PhylogeneticEM&version=1.0.0&to=ape" data-mini-rdoc="ape::phylo">phylo</a></code>, with branch
lengths.

phylo


Re-scale the branch length of the tree so that a BM running
on the new tree produces the same observations at the tips than an OU with
parameter alpha.



Implementation of the automatic shift detection method for
Brownian Motion (BM) or Ornstein–Uhlenbeck (OU) models of trait evolution on
phylogenies. Some tools to handle equivalent shifts configurations are also
available.

Paul Bastide

PhylogeneticEM

Automatic Shift Detection using a Phylogenetic EM

transform_branch_length function

A phylogenetic tree of class <code><a rd-options='ape' href='phylo'>phylo</a></code>, with branch
lengths.

transform_branch_length: Transform branch length for a re-scaled BM

Description

Usage

Arguments

Value