Learn R Programming

PhylogeneticEM (version 1.0.0)

update.compute_betas_from_shifts: Update function ofr optimal value computation

Description

update.compute_betas_from_shifts computes the optimal value at a daughter node, knowing the optimal value at the parent node and the vector of shifts.

Usage

update.compute_betas_from_shifts(edgeNbr, ancestral, shifts, ...)

Arguments

edgeNbr
: Number of the edge considered
ancestral
: Computed vector for the parental node
shifts
position and values of the shifts

Value

Updated matrix of size (nNodes + ntaxa)x1.

Details

This function is used in function compute_betas_from_shifts and is designed to furnish function recursionDown with the right structure of data.