compute_var_M.BM
finds the variance that is the maximum of likelihood
compute_var_M.BM(phylo, var_diff, diff_exp, edges_max, random.root, mu)
Tree
variances of differences result of function compute_var_diff.BM
differences of expectations result of function compute_diff_exp.BM
Edges where the shifts occur result of function segmentation.BM
a p x p matrix : the computed variance
Given the variances, the costs0 and the edges where the shifts occurs, the computation of the maximum of likelihood in the variance is simple.