find_rotation

an object of class <code><a rd-options="" href="/link/PhyloEM?package=PhylogeneticEM&version=1.2.1" data-mini-rdoc="PhylogeneticEM::PhyloEM">PhyloEM</a></code>.

res1

res2

relative numerical tolerance. Default to <code>.Machine$double.eps^(0.5)</code>.

<code>find_rotation</code> takes two fits from from <code><a rd-options="" href="/link/PhyloEM?package=PhylogeneticEM&version=1.2.1" data-mini-rdoc="PhylogeneticEM::PhyloEM">PhyloEM</a></code>,
and test if their datasets are equal up to a rotation.

Implementation of the automatic shift detection method for
Brownian Motion (BM) or Ornstein<e2><80><93>Uhlenbeck (OU) models of trait evolution on
phylogenies. Some tools to handle equivalent shifts configurations are also
available. See Bastide et al. (2017) <doi:10.1111/rssb.12206> and
Bastide et al. (2018) <doi:10.1093/sysbio/syy005>.

Paul Bastide

PhylogeneticEM

Automatic Shift Detection using a Phylogenetic EM

Mahendra Mariadassou

find_rotation function

an object of class <code><a rd-options='' href='PhyloEM'>PhyloEM</a></code>.

<code>find_rotation</code> takes two fits from from <code><a rd-options='' href='PhyloEM'>PhyloEM</a></code>,
and test if their datasets are equal up to a rotation.

find_rotation: Test for rotation invariant datasets

Description

Usage

Arguments

Value