PhylogeneticEM (version 1.2.1)

penalty_pBIC: Penalty function type pBIC

Description

penalty_pBIC_scalarOU is the pBIC.

Usage

penalty_pBIC(all_params, model_complexity, independent, tree, times_shared,
  distances_phylo, T_tree, p, K, ntaxa, process)

Arguments

model_complexity

the complexity of the set of models with dimension K.

K

the dimension of the model.

ntaxa

the number of tips.

C

a constant, C > 1. Default is C = 1.1 (as suggested in Baraud Giraud Huet (2009))

Value

value of the penalty.

See Also

penalty_BirgeMassart_shape1, penalty_BirgeMassart_shape2