sample_edges_intervals

<code>sample_edges_intervals</code> samples K shifts, each in one of the K intervals
regularly spaced on the height of the tree.

internal

Implementation of the automatic shift detection method for
Brownian Motion (BM) or Ornstein–Uhlenbeck (OU) models of trait evolution on
phylogenies. Some tools to handle equivalent shifts configurations are also
available. See Bastide et al. (2017) <doi:10.1111/rssb.12206> and
Bastide et al. (2018) <doi:10.1093/sysbio/syy005>.

Paul Bastide

PhylogeneticEM

Automatic Shift Detection using a Phylogenetic EM

Mahendra Mariadassou

sample_edges_intervals function

<dl><dt>tree</dt>
<dd>: input tree</dd>
<dt>K</dt>
<dd>: number of edges to be sampled.</dd></dl>

Arguments

Sample equally spaced edges. — sample_edges_intervals

<dl>

<dt>tree</dt>
<dd>: input tree</dd>


<dt>K</dt>
<dd>: number of edges to be sampled.</dd>

</dl>

sample_edges_intervals: Sample equally spaced edges.

Description

Usage

Value

Arguments

Details