check_range_alpha

Check that the chosen values of alpha are not too large
or too small, in order to avoid numerical instabilities.

internal

Implementation of the automatic shift detection method for
Brownian Motion (BM) or Ornstein–Uhlenbeck (OU) models of trait evolution on
phylogenies. Some tools to handle equivalent shifts configurations are also
available. See Bastide et al. (2017) <doi:10.1111/rssb.12206> and
Bastide et al. (2018) <doi:10.1093/sysbio/syy005>.

Paul Bastide

PhylogeneticEM

Automatic Shift Detection using a Phylogenetic EM

Mahendra Mariadassou

check_range_alpha function

<dl><dt>alpha</dt>
<dd>a vector of alpha values.</dd>
<dt>h_tree</dt>
<dd>the total height of the tree.</dd></dl>

Arguments

Check range of alpha — check_range_alpha

<dl>

<dt>alpha</dt>
<dd>a vector of alpha values.</dd>


<dt>h_tree</dt>
<dd>the total height of the tree.</dd>

</dl>

check_range_alpha: Check range of alpha

Description

Usage

Arguments