matrix_of_possibles

<code>matrix_of_possibles</code> is used in function <code>update.enumerate_parsimony</code>
to compute, from the list of possible matrices for the daughters, the matrix for
the node (a group for the parent being fixed).

internal

Implementation of the automatic shift detection method for
Brownian Motion (BM) or Ornstein–Uhlenbeck (OU) models of trait evolution on
phylogenies. Some tools to handle equivalent shifts configurations are also
available. See Bastide et al. (2017) <doi:10.1111/rssb.12206> and
Bastide et al. (2018) <doi:10.1093/sysbio/syy005>.

Paul Bastide

PhylogeneticEM

Automatic Shift Detection using a Phylogenetic EM

Mahendra Mariadassou

matrix_of_possibles function

<dl><dt>matrices</dt>
<dd>a list of matrices with ndaughters entries.</dd></dl>

Arguments

Compute parent matrix from possibles daughter matrices. — matrix_of_possibles

<dl>

<dt>matrices</dt>
<dd>a list of matrices with ndaughters entries.</dd>

</dl>

matrix_of_possibles: Compute parent matrix from possibles daughter matrices.

Description

Usage

Value

Arguments

Details