phped

<p>A data.frame with a pedigree; used in manuals, stored in
PolyHaplotyper_small.RData</p>

datasets

Infer the genetic composition of individuals
in terms of haplotype dosages for a haploblock, based
on bi-allelic marker dosages, for any ploidy level.
Reference: Voorrips and Tumino: PolyHaplotyper: haplotyping in polyploids based on bi-allelic marker dosage data.
Submitted to BMC Bioinformatics (2021).

Roeland Voorrips

PolyHaplotyper

Assignment of Haplotypes Based on SNP Dosages in Diploids and
Polyploids

phped function

<p>a data.frame with 661 rows (samples) and
4 columns: genotype, mother, father, sample_nr</p>

phped: pedigree

Description

Arguments

Format