Pv3Rs

Pv3Rs-package

<img src="figures/logo.png?package=Pv3Rs&version=1.0.0" style="float: right" alt="logo" width="120">
Plot malaria parasite genetic data on two or more episodes. Compute per-person posterior probabilities that each Plasmodium vivax (Pv) recurrence is a recrudescence, relapse, or reinfection (3Rs) using per-person P. vivax genetic data on two or more episodes and a statistical model described in Taylor, Foo and White (2022) tools:::Rd_expr_doi("10.1101/2022.11.23.22282669"). Plot per-recurrence posterior probabilities.

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Plot malaria parasite genetic data on two or more episodes.
Compute per-person posterior probabilities that each
Plasmodium vivax (Pv) recurrence is a recrudescence, relapse,
or reinfection (3Rs) using per-person P. vivax genetic data on two or
more episodes and a statistical model described in
Taylor, Foo and White (2022) <doi:10.1101/2022.11.23.22282669>.
Plot per-recurrence posterior probabilities.

Aimee Taylor

Estimate the Cause of Recurrent Vivax Malaria using Genetic Data

Yong See Foo

Tymoteusz Kwiecinski

Duncan Murdoch

Mans Magnusson

Institut Pasteur 

European Union, Project 101110393 

Pv3Rs-package function

Maintainer: Aimee Taylor <a href="/link/aimee.taylor%40pasteur.fr?package=Pv3Rs&version=1.0.0" data-mini-rdoc="Pv3Rs::aimee.taylor@pasteur.fr">aimee.taylor@pasteur.fr</a> (<a href="https://orcid.org/0000-0002-2337-8992">ORCID</a>)
Authors:<ul>
<li>Yong See Foo (<a href="https://orcid.org/0000-0003-3010-9106">ORCID</a>)</li>
</ul>Other contributors:<ul>
<li>Tymoteusz Kwiecinski (compiled included macros.Rd) [compiler]</li>
<li>Duncan Murdoch (author of included macros.Rd) [contributor]</li>
<li>Mans Magnusson (author of included msg_progress_bar.R) [contributor]</li>
<li>Institut Pasteur [copyright holder]</li>
<li>European Union, Project 101110393 [funder]</li>
</ul>

Author

<img src='figures/logo.png' style='float: right' alt='logo' width='120' />
Plot malaria parasite genetic data on two or more episodes. Compute per-person posterior probabilities that each Plasmodium vivax (Pv) recurrence is a recrudescence, relapse, or reinfection (3Rs) using per-person P. vivax genetic data on two or more episodes and a statistical model described in Taylor, Foo and White (2022) tools:::Rd_expr_doi("10.1101/2022.11.23.22282669"). Plot per-recurrence posterior probabilities.

Pv3Rs: Estimate the Cause of Recurrent Vivax Malaria using Genetic Data — Pv3Rs-package

Maintainer: Aimee Taylor <a href='mailto:aimee.taylor@pasteur.fr'>aimee.taylor@pasteur.fr</a> (<a href='https://orcid.org/0000-0002-2337-8992'>ORCID</a>)
Authors:<ul>
<li>Yong See Foo (<a href='https://orcid.org/0000-0003-3010-9106'>ORCID</a>)</li>
</ul>

Other contributors:<ul>
<li>Tymoteusz Kwiecinski (compiled included macros.Rd) [compiler]</li>
<li>Duncan Murdoch (author of included macros.Rd) [contributor]</li>
<li>Mans Magnusson (author of included msg_progress_bar.R) [contributor]</li>
<li>Institut Pasteur [copyright holder]</li>
<li>European Union, Project 101110393 [funder]</li>
</ul>

Pv3Rs-package: Pv3Rs: Estimate the Cause of Recurrent Vivax Malaria using Genetic Data

Description

Arguments

Author

See Also