extract_sample_names_from_layout

Function extracts sample names from the layout file based on the provided locations.
Function assumes that the plate is 96-well and extracts
the sample names according to the provided location strings.

internal

Speeds up the process of loading raw data from MBA (Multiplex Bead Assay) examinations, performs quality control checks, and automatically normalises the data, preparing it for more advanced, downstream tasks. The main objective of the package is to create a simple environment for a user, who does not necessarily have experience with R language. The package is developed within the project of the same name - 'PvSTATEM', which is an international project aiming for malaria elimination.

Tymoteusz Kwiecinski

PvSTATEM

Reading, Quality Control and Preprocessing of MBA (Multiplex
Bead Assay) Data

Jakub Grzywaczewski

Mateusz Nizwantowski

Przemyslaw Biecek

Nuno Sepulveda

extract_sample_names_from_layout function

<dl><dt>layout_names</dt>
<dd>a vector of sample names from the layout file</dd>
<dt>locations</dt>
<dd>a vector of locations in the form of A1, B2, etc.</dd></dl>

Arguments

Extract sample names from layout — extract_sample_names_from_layout

<dl>

<dt>layout_names</dt>
<dd>a vector of sample names from the layout file</dd>


<dt>locations</dt>
<dd>a vector of locations in the form of A1, B2, etc.</dd>

</dl>

extract_sample_names_from_layout: Extract sample names from layout

Description

Usage

Arguments