QTL.gCIMapping (version 2.0)

WangF: To perform QTL mapping with wang method

Description

Genome-wide Composite Interval Mapping

Usage

WangF(pheRaw,genRaw,mapRaw1,yygg1,cov_en,Population,WalkSpeed,CriLOD,dir)

Arguments

pheRaw

phenotype matrix.

genRaw

genotype matrix.

mapRaw1

linkage map matrix.

yygg1

the transformed covariate matrix .

cov_en

raw covariate matrix.

Population

population flag.

WalkSpeed

Walk speed for Genome-wide Scanning.(WalkSpeed=1).

CriLOD

Critical LOD scores for significant QTL (CriLOD=2.5).

dir

file path in your computer.

Examples

# NOT RUN {
G1=data(gen)
P1=data(phe)
M1=data(map)
WangF(phe,gen,map,yygg1=NULL,cov_en=NULL,Population="DH",1,2.5,dir=tempdir())
# }