pascalTriangle

This function generates the Pascal triangle for a given ploidy value. The Pascal triangle is used to define the expected peaks for each ploidy level, which can be useful in various genetic analyses.

Provides functions for estimating ploidy levels and detecting aneuploidy in individuals using
allele intensities or allele count data from high-throughput genotyping platforms, including
single nucleotide polymorphism (SNP) arrays and sequencing-based technologies. Implements an extended version of the 'PennCNV'
signal standardization method by Wang et al. (2007) <doi:10.1101/gr.6861907> for higher ploidy
levels. Computes B-allele frequencies (BAF), z-scores, and identifies copy number variation patterns.

Cristiane Taniguti

Qploidy

Estimation of Ploidy and Detection of Aneuploidy Using
Genotyping Data

Jeekin Lau

David Byrne

Oscar Riera-Lizarazu

pascalTriangle function

<dl><dt>h</dt>
<dd>An integer representing the ploidy value.</dd></dl>

Arguments

Pascal Triangle for Expected Peaks Calculation — pascalTriangle

<dl>

<dt>h</dt>
<dd>An integer representing the ploidy value.</dd>

</dl>

pascalTriangle: Pascal Triangle for Expected Peaks Calculation

Description

Usage

Value

Arguments