QuICSeedR (version 0.1.2)

BulkReadMARS: Bulk Read MARS data

Description

Bulk Read MARS data

Usage

BulkReadMARS(path, plate_subfix, raw_subfix, helper_func = NULL)

Value

A list containing data from each folder, including plate, raw, and replicate data.

Arguments

path

Character string specifying the path to the parent directory containing the data folders.

plate_subfix

Character string used to identify plate data files.

raw_subfix

Character string used to identify raw data files.

helper_func

Optional function to be applied to each column of the plate data (default: NULL).

Details

The example dataset, located in inst/extdata/, consists of folders representing individual experimental runs. This dataset is a subset of the data used in a publication led by Dr. Stuart Lichtenberg. For detailed information about the experiments, please contact Dr. Stuart Lichtenberg at [e-mail].

Each folder contains two Excel files:

• A file with the suffix plate: Contains the plate setup and experimental information.

• A file with the suffix raw: Contains fluorescence data exported from MARS software.

Examples

path = system.file("extdata", package = "QuICSeedR")
data <- BulkReadMARS(path = path,
                     plate_subfix = 'plate',
                     raw_subfix = 'raw')
str(data)