ProbDistMatrix

<p>The classic output from Schrodinger function, with the normalized Alt</p>

Schrod_cells

<p>Creates a matrix of distance between two points based on the p-value to be from the same distribution</p>

Using HTS data, clusters mutations in order to recreate putative
clones from the data provided. It requires genotype at the location of the
variant as well as the depth of coverage and number of reads supporting the
mutation. Additional information may be provided, such as the contamination
in the tumor sample. This package also provides a function QuantumCat() which
simulates data obtained from tumor sequencing.

Paul Deveau

ProbDistMatrix: Distance

Description

Usage

Arguments

Value