zscore

a numeric vector of depth of sequencing for each variant

Depth

a numeric vector of the number of reads supporting each variant

Computes the z-score of mutations being from the same distribution

Using HTS data, clusters mutations in order to recreate putative
clones from the data provided. It requires genotype at the location of the
variant as well as the depth of coverage and number of reads supporting the
mutation. Additional information may be provided, such as the contamination
in the tumor sample. This package also provides a function QuantumCat() which
simulates data obtained from tumor sequencing.

zscore: Z-score

Description

Usage

Arguments

Value