plot.R0.S

Result of sensitivity.analysis (class R0.S)

Specify the desired output. Can be "heatmap" (default), "criterion", or both.

what

Optional. If date of first observation is specified, number of day between each incidence observation

time.step

Number of results to ignore (time period of X days) when looking for highest Rsquared value.

skip

Estimation of reproduction numbers for disease outbreak, based on
incidence data. The R0 package implements several documented methods. It is
therefore possible to compare estimations according to the methods used.
Depending on the methods requested by user, basic reproduction number
(commonly denoted as R0) or real-time reproduction number (referred to as
R(t)) is computed, along with a 95% Confidence Interval. Plotting outputs
will give different graphs depending on the methods requested : basic
reproductive number estimations will only show the epidemic curve
(collected data) and an adjusted model, whereas real-time methods will also
show the R(t) variations throughout the outbreak time period. Sensitivity
analysis tools are also provided, and allow for investigating effects of
varying Generation Time distribution or time window on estimates.

plot.R0.S: Plot objects from sensitivity.analysis

Description

Usage

Arguments

Value

Details

Examples