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R2admb (version 0.7.16.3)
'ADMB' to R Interface Functions
Description
A series of functions to call 'AD Model Builder' (i.e., compile and run models) from within R, read the results back into R as 'admb' objects, and provide standard accessors (i.e. coef(), vcov(), etc.)
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Version
0.7.16.3
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Install
install.packages('R2admb')
Monthly Downloads
1,136
Version
0.7.16.3
License
GPL
Maintainer
Ben Bolker
Last Published
November 7th, 2022
Functions in R2admb (0.7.16.3)
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compile_admb
Compile ADMB files, run, read output
mcmc.control
Control options for MCMC after ADMB fitting
do_admb
Compile and/or run an ADMB model, collect output
plot.admb_hist
Plot MCMC histogram
extract_gradient
Extract gradients
AIC.admb
Standard accessor functions for ADMB model fits
find_large_cor
Find large correlations
R2admb-package
ADMB to R interface functions
admb_version
Query ADMB version
read_pars
Read in parameters from an AD Model Builder run
read_plt
Read in ADMB profile file
run.control
set run options for running ADMB via R
write_pin
Write parameter and data files for ADMB
setup_admb
Set up AD Model Builder environment variables