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R2ucare (version 1.0.2)

Goodness-of-Fit Tests for Capture-Recapture Models

Description

Performs goodness-of-fit tests for capture-recapture models as described by Gimenez et al. (2018) . Also contains several functions to process capture-recapture data.

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Install

install.packages('R2ucare')

Monthly Downloads

313

Version

1.0.2

License

GPL (>= 2)

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Repository

https://github.com/oliviergimenez/R2ucare

Maintainer

Olivier Gimenez

Last Published

July 11th, 2022

Functions in R2ucare (1.0.2)

Overall goodness-of-fit test for the Jolly-Move model

Pooling algorithm

Read capture-recapture data with Headed format used by program E-SURGE

Goodness-of-fit test for contingency tables

Overall goodness-of-fit test for the Cormack-Jolly-Seber model

Ungroup encounter capture-recapture data in individual histories

Multistate m-array

Pooling algorithm (multisite goodness-of-fit tests)

Reformat outputs of multinomial mixture distributions parameters

Read capture-recapture data with Input (.inp) format used by program MARK

Replicate and tile a matrix

pooling_mixtures

Pooling algorithm (multisite goodness-of-fit tests)

Expected values in a contingency table

Test of independence for 2x2 contingency tables

Group individual capture-recapture data in encounter histories

Test of independence for rxc contingency tables

Estimation of multinomial mixture distributions parameters

Group individual capture-recapture data in encounter histories along specific column(s)

deviance_mixture

Deviance of multinomial mixture distributions

Inverse generalized logit link

m-array: table of first recaptures