annotation.summary

Write a .csv file containing a summary of the annotations in the ramclustR object.

A feature clustering algorithm for non-targeted mass spectrometric metabolomics data. This method is compatible with gas and liquid chromatography coupled mass spectrometry, including indiscriminant tandem mass spectrometry data <DOI: 10.1021/ac501530d>.

Helge Hecht

RAMClustR

Mass Spectrometry Metabolomics Feature Clustering and
Interpretation

Corey D. Broeckling

Fayyaz Afsar

Steffen Neumann

Asa Ben-Hur

Jessica Prenni

Matej Trojak

Zargham Ahmad

annotation.summary function

<dl><dt>ramclustObj</dt>
<dd>R object - the ramclustR object which was used to write the .mat or .msp files</dd>
<dt>outfile</dt>
<dd>file path/name of output csv summary file. if NULL (default) will be exported to spectra/annotaionSummary.csv</dd></dl>

Arguments

Author

annotation.summary() — annotation.summary

<dl>

<dt>ramclustObj</dt>
<dd>R object - the ramclustR object which was used to write the .mat or .msp files</dd>


<dt>outfile</dt>
<dd>file path/name of output csv summary file. if NULL (default) will be exported to spectra/annotaionSummary.csv</dd>

</dl>

annotation.summary()

annotation.summary: annotation.summary()

Description

Usage

Value

Arguments

Author

Details

References