filter_blanks

A feature clustering algorithm for non-targeted mass spectrometric metabolomics data. This method is compatible with gas and liquid chromatography coupled mass spectrometry, including indiscriminant tandem mass spectrometry data <DOI: 10.1021/ac501530d>.

Helge Hecht

RAMClustR

Mass Spectrometry Metabolomics Feature Clustering and
Interpretation

Corey D. Broeckling

Fayyaz Afsar

Steffen Neumann

Asa Ben-Hur

Jessica Prenni

Matej Trojak

Zargham Ahmad

filter_blanks function

<dl><dt>ramclustObj</dt>
<dd>ramclustObj containing MSdata with optional MSMSdata (MSe, DIA, idMSMS)</dd>
<dt>keep</dt>
<dd>union of which signal is at least 3x larger, output of filter_signal()</dd>
<dt>d1</dt>
<dd>MS Data</dd></dl>

Arguments

filter_blanks — filter_blanks

<dl>

<dt>ramclustObj</dt>
<dd>ramclustObj containing MSdata with optional MSMSdata (MSe, DIA, idMSMS)</dd>


<dt>keep</dt>
<dd>union of which signal is at least 3x larger, output of filter_signal()</dd>


<dt>d1</dt>
<dd>MS Data</dd>

</dl>

filter_blanks: filter_blanks

Description

Usage

Value

Arguments